Earth Sciences Division (ESD) Department of Energy (DOE) Lawrence Berkeley National Laboratory (LBNL)

Lauren Tom's Publications

    1. Kellogg, C.A., Y.M. Piceno, L.M. Tom, T.Z. DeSantis, M.A. Gray, D.G. Zawada, and G.L. Andersen. 2013. Comparing Bacterial Community Composition between Healthy and White Plague-Like Disease States in Orbicella annularis Using PhyloChip™ G3 Microarrays. PLoS ONE. 8 (11) pp. e79801. DOI: 10.1371/journal.pone.0079801.
    2. Briggs, B.R., E.L. Brodie, L.M. Tom, H. Dong, H. Jiang, Q. Huang, S. Wang, W. Hou, G. Wu, L. Huang, B.P. Hedlund, C. Zhang, P. Dijkstra, B.A. Hungate. 2013. Seasonal patterns in microbial communities inhabiting the hot springs of Tengchong, Yunnan Providence, China. Environmental Microbiology. DOI: 10.1111/1462-2920.12311.
    3. Mello, A., G-C. Ding, Y.M. Piceno., C. Napoli, L.M. Tom, T.Z. DeSantis, G.L. Andersen, K. Smalla, P. Bonfante. 2013. Truffle Brûlés Have an Impact on the Diversity of Soil Bacterial Communities. PLoS ONE. 8 (4) pp. e61945. DOI: 10.1371/journal.pone.0061945.s007.
    4. Korves, T.M., Y.M. Piceno, L.M. Tom, T.Z. DeSantis, B.W. Jones, G.L. Andersen and G.M. Hwang. 2013. Bacterial communities in commercial aircraft high-efficiency particulate air (HEPA) filters assessed by PhyloChip analysis. Indoor Air. 23 (1): 50-61. DOI: 10.1111/j.1600­0668.2012.00787.x.
    5. Beazley, M.J., R.J. Martinez, S. Rajan, J. Powell, Y.M. Piceno, L.M. Tom, G.L. Andersen, T.C. Hazen, J.D. Van Nostrand, J. Zhou, B. Mortazavi and P.A. Sobecky. 2012. Microbial community analysis of a coastal salt marsh affected by the Deepwater Horizon Oil Spill. PLoS One. 7 (7): e41305. DOI: 10.1371/journal.pone.0041305.
    6. Mason O.U., T.C. Hazen, S. Borglin, P.S.G. Chain, E.A. Dubinsky, J.L. Fortney, J. Han, H-Y.N. Holman, J. Hultman, R. Lamendella, R. Mackelprang, S. Malfatti, L.M. Tom, S.G. Tringe, T. Woyke, J. Zhou, E.M. Rubin and J.K. Jansson. 2012. Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill. ISME Journal. 6 (9): 1715-27. DOI: 10.1038/ismej.2012.59.
    7. De Jesús-Laboy, K.M., F. Godoy-Vitorino, Y.M. Piceno, L.M. Tom, I.G. Pantoja-Feliciano, M.J. Rivera-Rivera, G.L. Andersen, and M.G. Domínguez-Bello. 2012. Comparison of the fecal microbiota in feral and domestic goats. Genes. 3 (1): 1-18. DOI: 10.3390/genes3010001. 
    8. Kellogg, C.A., Y.M. Piceno, L.M. Tom, T.Z. DeSantis, D.G. Zawada, and G.L. Andersen. 2012. PhyloChip microarray comparison of sampling methods used for coral microbial ecology. Journal of Microbiological Methods. 88 (1): 103-109. DOI: 10.1016/j.mimet.2011.10.019.
    9. DeAngelis, K.M., C.H. Wu, H.R. Beller, E.L. Brodie, R. Chakraborty, T.Z. DeSantis, J.L. Fortney, T.C. Hazen, S.R. Osman, M.E. Singer, L.M. Tom, and G.L. Andersen. 2011. PCR amplification-independent methods for detection of microbial communities by the high-density microarray PhyloChip. Applied and Environmental Microbiology. 77 (18): 6313-6322. DOI: 10.1128/AEM.05262­11.
    10. García-Amado, M.A., F. Godoy-Vitorino, Y.M. Piceno, L.M. Tom, G.L. Andersen, E.A. Herrera, M.G. Domínguez-Bello. 2011. Bacteria diversity in the cecum of the world’s largest living rodent (Hydrochoerus hydrochaeris). Microbial Ecology Journal. 63 (4): 719-725. DOI: 10.1007/s00248­011­9963­z.
    11. Lu, Z., Y. Deng, J.D. Van Nostrand, Z. He, J. Voordeckers, A. Zhou, Y-J. Lee, O.U. Mason, E.A. Dubinsky, K.L. Chavarria, L.M. Tom, J.L. Fortney, R. Lamendella, J.K. Jansson, P. D’haeseleer, T.C. Hazen, and J. Zhou. 2011. Microbial gene functions enriched in the Deepwater Horizon deep-sea oil plume. ISME Journal. 6 (2): 451-60. DOI: 10.1038/ismej.2011.91.
    12. Chourey, K., J. Jansson, N. VerBerkmoes, M. Shah, K. Chavarria, L. Tom, E. Brodie, and R. Hettich. 2010. Direct cellular lysis/protein extraction protocol for soil metaproteomics. Journal of Proteome Research. 9 (12): 6615-6622. DOI: 10.1021/pr100787q.
    13. Hazen, T.C., E.A. Dubinsky, T.Z. DeSantis, G.L. Andersen, Y.M. Piceno, N. Singh, J.K. Jansson, A. Probst, S.E. Borglin, J.L. Fortney, W.T. Stringfellow, M. Bill, M.E. Conrad, L.M. Tom, K.L. Chavarria, T.R. Alusi, R. Lamendella, D.C. Joyner, C. Spier, J. Baelum, M. Auer, M.L. Zemla, R. Chakraborty, E.L. Sonnenthal, P. D'haeseleer, H-Y.N. Holman, S. Osman, Z. Lu, J.D. Van Nostrand, Y. Deng, J. Zhou, and O.U. Mason. 2010. Deep-sea oil plume enriches indigenous oil-degrading bacteria. Science. 330 (6001): 204–208. DOI: 10.1126/science.1195979.
    14. Lea A.J., J.P. Barrera, L.M. Tom, D.T. Blumstein. 2008. Heterospecific eavesdropping in a nonsocial species. Behavioral Ecology. 19 (5): 1041-1046. DOI:10.1093/beheco/arn064.
    15. Lammer E.J., D.M., Iovannisci, L. Tom, K. Schultz, G.M. Shaw. 2008. Gastroschisis: A gene-environment model involving the VEGF-NOS3 pathway. American Journal of Medical Genetics Part C (Seminars in Medical Genetics). 148C (3): 213-218. DOI: 10.1002/ajmg.c.30182.

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