Romy Chakraborty's Publications

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Book Reviews

  • Romy Chakraborty and Terry C Hazen. (2006) Environmental Toxicology 2nd edition by Alan Scragg. In The Quarterly Review of Biology 81(3), University Of Chicago Press.

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Book Chapters

  • Coates J.D and Chakraborty R. (2003) Anaerobic Bioremediation - An Emerging Resource for Environmental Cleanup. In, Bioremediation: A Critical Review. Horizon Scientific Press (Editors: I.M. Head, I. Singleton and M. Milner University of Newcastle, UK).
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Publications in Journals

  1. Coates J.D, Chakraborty R, Lack, J.G, O’Connor, S.M, Cole, K.A, Bender K.S, andAchenbach, L.A. (2001) Anaerobic benzene oxidation coupled to nitrate reduction inpure culture by two novel organisms. Nature 411:1039-1043.
  2. Coates J.D, Chakraborty R, O'Connor, S.M, and Thieme, J. (2001) The geochemicaleffects of microbial humic substances reduction. Acta hydrochimica et hydrobiologica28(7): 420-427.
  3. Coates J.D, Cole K.A, Chakraborty R, O’Connor S.M, Achenbach L.A. (2002). Thediversity and ubiquity of bacteria utilizing humic substances as an electron donor foranaerobic respiration. Applied and Environmental Microbiology 68(5): 2445-2452.
  4. Lack J.G, Chaudhuri S. K, Chakraborty R, Achenbach L.A, Coates J.D. (2002)Anaerobic biooxidation of Fe (II) by Dechlorosoma suillum. Microbial Ecology 43: 424­-431.
  5. Bender K.S, Chakraborty R, O’Connor S.M, Coates J.D, Achenbach L.A. (2002)Sequencing and Transcriptional Analysis of the Chlorite Dismutase Gene ofDechloromonas agitata and Its Use as a Metabolic Probe. Applied and EnvironmentalMicrobiology 68(10): 4820-4826.
  6. Coates J.D, Chakraborty R, McInerney M.J, (2002) Anaerobic benzene biodegradation-a new era. Research in Microbiology 153: 621-628.
  7. Coates J.D and Chakraborty R. (2003) Anaerobic Bioremediation -An EmergingResource for Environmental Cleanup. In, Bioremediation: A Critical Review. HorizonScientific Press (Editors: I.M. Head, I. Singleton and M. Milner University of Newcastle,UK).
  8. Chakraborty R and Coates, J.D. (2004) Anaerobic degradation of monoaromatichydrocarbons. Applied Microbiology and Biotechnology 64: 437-446.
  9. Chakraborty R and Coates J.D. (2005). Hydroxylation and carboxylation – two crucialsteps of anaerobic benzene degradation by Dechloromonas strain RCB. Applied andEnvironmental Microbiology 71(9): 5427-5432.
  10. Bender K. S, Shang C, Chakraborty R, Belchik S.M, Coates J.D, and Achenbach L.A(2005). Identification, characterization, and classification of genes encoding perchloratereductase. Journal Of Bacteriology. 187: 5090-5096.
  11. Chakraborty R, O’Connor S.M, Chan E, and Coates J. D (2005) Anaerobic degradationof BTEX compounds by Dechloromonas strain RCB. Applied and EnvironmentalMicrobiology 71(12): 8649-8655.
  12. Tang Y.J*, Chakraborty R*, Martin H.G, Chu J, Hazen T.C, Keasling J.D (2007) Fluxanalysis of central metabolic pathways in the Fe (III)-reducing organism Geobactermetallireducens via 13C isotopic labeling. Applied and Environmental Microbiology73(12): 3859-3864.
  13. Mukhopadhyay A, Redding A.M, Joachimiak M.P, Arkin A.P. Borglin S.E, Dehal P.S,Chakraborty R, Geller J.T, Hazen T.C, He Q, Joyner D.C, Martin V.J.J, Wall J.D, YangZ.K, Zhou J, Keasling J.D (2007). Cell wide responses to low oxygen exposure inDesulfovibrio vulgaris Hildenborough. Journal Of Bacteriology 189(16): 5996-6010.
  14. Faybishenko, B., Hazen T.C, Long P.E, Brodie E.L, Conrad M.E, Hubbard S.S, JoynerD.C, Borglin S.E, Chakraborty R, Williams K.H, Peterson J.E, Chen J, Tokunaga T.K,Wan J, Firestone M, Newcomer D.L, Resch C.T, Cantrell K.J, Willett A, Koenigsberg S.(2008). In Situ Long-Term Bioimmobilization of Cr(VI) in Groundwater Using 13C­Labeled Slow-Release Lactate. Environmental Science and Technology. 42(22): 8478­8485.
  15. Hazen T.C, Chakraborty R, Gregory I.R, Bowman J.P, Jimenez L, Zhang D, FlemingJ.M, Sayler G.S, Pfiffner S.M, Brockman F.J. (2009) Use of Gene Probes to Assess the Impact and Effectiveness of Aerobic In Situ Bioremediation of TCE and PCE. Archives.

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