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Publications - Full Listing

  1. Wanner, C., Sonnenthal, E., Assessing the control on the effective kinetic Cr isotope fractionation factor: A reactive transport modeling approach, Vol. 337-338, Pages 88-98, Jan 2013, doi.org/10.1016/j.chemgeo 2012.11.008, Chemical Geology, 2013. (article)
  2. Barlett M., Sun Moon, H., Peacock, A. A., Hedrick D. B., Williams, K. H., Lovley, D. R., Long, P. E., and Jaffe, P. R., Uranium reduction and microbial community development in response to stimulation with different electron donors, Biodegradation, 23, doi:10.1007/s10532-011-9531-8, 2012. (article)
  3. Bea S., Wainwright H., Spycher N., Faybishenko B., Hubbard S.S., and M.E. Denham, Identifying key controls on the behavior of an acidic-U(VI) plume at the Savannah River Site using reactive transport modeling, Journal of Contaminant, (2012). (article)
  4. Armstrong, R., Ajo-Franklin, J. "Investigating Biomineralization using Synchrotron based X-Ray Computed Microtomography.” Geophysical Research Letters, 2011. (article)
  5. Berryman, J., “Bounds and self-consistent estimates for elastic constants of granular polycrystals composed of orthorhombics or crystals with higher symmetries.  Physical Review E,  2011. (article)
  6. Campbell, K. M., Kukkadapu, R.K., Qafoku, N.P., Peacock, A.D., Lesher, E., Williams, K.H., Bargar, J.R., Wilkins, M.J., Figueroa, L., Ranville, J., Davis, J.A., and Long, P.E., Geochemical, mineralogical and microbiological characteristics of sediment from a naturally reduced zone in a uranium contaminated aquifer. Appl. Geochem., 27(8), 1499-1511, doi:10.1016/j.apgeochem.2012.04.013, 2012. (article)
  7. Commer, M.,  Newman, G. A., Williams, K. H., and Hubbard, S. S.  “Three-dimensional  induced polarization data inversion for complex resistivity.” Geophysics, 2011. (article)
  8. Druhan, J., Steefel, C., Molins, S., Williams, K.H., Conrad, M., DePaolo, D., Timing the onset of sulfate reduction over multiple subsurface acetate amendments by measurement and modeling of sulfur isotope fractionation, Environmental Science and Technology, dx.doi.org/10.1021/es302016p, 2012. (article)
  9. Flores Orozco, A., Williams, K. H., and Kemna, A., Time-lapse spectral induced polarization imaging of stimulated uranium bioremediation, Near Surface Geophysics., 2012 (in press).
  10. Fox, P. M., Davis, J.A., Hay, M.B., Conrad, M.E., Campbell, K.M., Williams, K.H., and Long, P.E., Rate-limited U(VI) desorption during a small-scale tracer test in a heterogeneous uranium-contaminated aquifer, Water Resour. Res., 48, W05512, doi:10.1029/2011WR011472, 2012. (article)
  11. Handley, K. M., Wrighton, K. C., Piceno, Y. M., Andersen, G. L., DeSantis T. Z., Williams, K. H., Wilkins, M. J., N’Guessan, A. Peacock, L., A., Bargar, J., Long, P. E., and Banfield, J. F., High-density PhyloChip profiling of stimulated aquifer microbial communities reveals a complex response to acetate amendment. FEMS Microbiol. Ecol., 81, 188-204, doi:10.1111/j.1574-6941.2012.01363.x, 2012. (article)
  12. Handley, K.M., VerBerkmoes, N.G., Steefel, C., Williams, K.H., Sharon, I., Miller, C., Frischkorn, K., Chourey, K., Thomas, B., Shah, M., Long, P.E., Hettich, R., Banfield, J., Biostimulation induces syntrophic interactions that impact C, S, and N cycling in a sediment microbial community, ISME Journal. 2012 Nov 29. doi: 10.1038/ismej.2012.148. (article)
  13. Flores Orozco, A., K.H. Williams, P.E. Long, S.S. Hubbard and A. Kemna, Using spectral induced polarization (SIP) to infer biogeochemical processes associated with bioremediation of a uranium-contaminated aquifer, JGR-Biogeosciences, 2011 (article)
  14. Wan, J., Dong, W. and Tokunaga, T., “Method to Attenuate U(VI) Mobility in Acidic Waste Plumes Using Humic Acids,” Environmental Science & Technology, 2011. composition: Proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI). Microbial Biotechnology, 4 (1), 55–63; published online, DOI:10.1111/j.1751-7915.2010.00194.x. (article)
  15. Bopp, C.J., IV, C.C. Lundstrom, T.M. Johnson, R.A. Sanford, P.E. Long, and K.H. Williams (2010), Uranium 238U/235U isotope ratios as indicators of reduction: Results from an in situ biostimulation experiment at Rifle, Colorado, USA. Environmental Science & Technology , doi: 10.1021/es100643v (article)
  16. Chen, J., S. Hubbard, K. Williams, S. Pride, L. Li, C. Steefel, and L. Slater, A state-space Bayesian framework for estimating biogeochemical transformations using time-lapse geophysical data. Water Resources Research, 45, W08420, doi:10.1029/ 2008WR007698, 2009. (article)
  17. K. H. Williams, P. E. Long, J. A. Davis, C. I. Steefel, M. J. Wilkins, A. L. N’Guessan, L. Yang, D. Newcomer, F. A. Spane, L. J. Kerkhof, L. McGuinness, R. Dayvault, and D. R. Lovely, Acetate availability and its influence on sustainable bioremediation of uranium-contaminated groundwater. Geomicro. J. (article)
  18. Elifantz, H., A. L. N'Guessan, P. J. Mouser, K. H. Williams, M. J. Wilkins, C. Risso, D. E. Holmes, P. E. Long, and D. R. Lovley, Expression of acetate permease-like (apl) genes in subsurface communities of Geobacter species under fluctuating acetate concentrations, FEMS Microbiol. Lett. , 2010. (article)
  19. Faybishenko, B., Fuzzy-probabilistic calculations of water-balance uncertainty, Stochastic Environmental Research and Risk Assessment, Vol. 24, No. 6, 939–952, 2010. (article)
  20. Li, L., C.I. Steefel, K.H. Williams, M.J. Wilkins, and S.S. Hubbard, Effects of physical and geochemical heterogeneities on mineral transformation and biomass accumulation during uranium bioremediation at Rifle, Colorado. Journal of Contaminant Hydrology 112, 45–63, 2010. (article)
  21. Minsley, B.J., Ajo-Franklin, J.B., Mukhopadhyay, A. and Morgan, F.D., Hydrogeophysical Methods for Analyzing Aquifer Storage and Recovery Systems, Ground Water,  2010 (article)
  22. N’Guessan, A.L., H. Elifantz1, K.P. Nevin1, P.J. Mouser, B. Methe, T. L. Woodard, K. Manley, K.H. Williams, M.J. Wilkins, J.T. Larsen, P.E. Long, and D.R. Lovley, Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer. ISME Journal, 4, 253–266, doi:10.1038/ ismej.2009.1152009, 2010. (article)
  23. Nico, P.S.; Kumfer, B.K.; Kennedy, I.M.; Anastasio, C.; “Redox Dynamics of Mixed Metal (Mn, Cr, and Fe) Ultrafine Particles”, Aerosol Sci. and Technol., 2009 43(1) 60-70 (article)
  24. Ntarlagiannis, D., R. Doherty, and K.H. Williams, Spectral induced polarization signatures of abiotic FeS precipitation. Geophysics, 2010. (article)
  25. Stewart, B.D., P.S. Nico, and S. Fendorf, Stability of uranium incorporated into Fe(hydr)oxides under fluctuating redox conditions. Environmental Science & Technology, 43(13), 4922–4927, 2009. (article)
  26. Stewart, B.D., R.T. Amos, P.S. Nico, and S. Fendorf, Influence of uranyl speciation and iron oxides on uranium biogeochemical redox reactions. Geomicrobiology Journal, 2010. (article)
  27. Wilkins, M.J., S.J. Callister, M. Miletto, K.H. Williams, C.D. Nicora, D.R. Lovley, P.E. Long, and M.S. Lipton, Development of a biomarker for Geobacter activity and strain composition: Proteogenomic analysis of the citrate synthase protein during bioremediation of U(VI), Microbial Biotechnology, 2010. (article)
  28. Williams, K.H., A. Kemna, M. Wilkins, J. Druhan, E. Arntzen, L. N’Guessan, P.E. Long, S.S. Hubbard, and J.F. Banfield, Geophysical monitoring of coupled microbial and geochemical processes during stimulated subsurface bioremediation, Environ. Sci. Technol., 43, 6717–6723, DOI 10.1021/es900855j, 2009. (article)
  29. Williams, K.H., A.L. N’Guessan, J. Druhan, P.E. Long, S.S. Hubbard, D.R. Lovley, and J.F. Banfield, Electrodic voltages accompanying stimulated bioremediation of a uranium-contaminated aquifer, J. Geophys. Res., doi:10.1029/2009JG001142, 2010. (article)
  30. Williams, K.H., K.P. Nevin, A. Franks, A. Englert, P.E. Long, and D.R. Lovley, An electrode-based approach for monitoring in situ microbial activity during subsurface bioremediation, Environmental Science and Technology, 44, 47–54, 2010. (article)
  31. Wu, Yu., S. Hubbard, K.H. Williams, and J. Ajo-Franklin, On the complex conductivity signatures of calcite precipitation, Journal of Geophysical Research—Biogeosciences, 115, G00G04, doi:10.1029/2009JG001129, 2010. (article)
  32. Yang, L; C.I. Steefel, M.A. Marcus, and J.R. Bargar, Kinetics of Fe(II)-catalyzed transformation of 6-line ferrihydrite under anaerobic flow conditions, Environmental Science & Technology, published online—doi: 10.1021/es1007565, 2010. (article)
  33. Beller, H.R., T. C. Leger, F. Bourguet, T.E. Letain, S.R. Kane, and M. A. Coleman, Identification of c-type cytochromes involved in anaerobic, bacterial U(VI) oxidation, Biodegredation, v. 20, 45-53, 2009.
  34. Borglin, S., D. Joyner, J. Jacobsen, A. Mukhopadhyay, and T. Hazen, Overcoming the anaerobic hurdle in phenotypic microarrays: Generation and visualization of growth curve data for Desulfovibrio vulgaris Hildenborough. Journal of Microbiological Methods, 76 (2), 159–168, 2009.
  35. Borglin, S., J. Shore, H. Worden, and R. Jain, An overview of the sustainability of solid waste management at military installations.  International Journal of Environmental Technology and Management (in press), August 2009.
  36. Elias, D., E. Drury, A. Redding, A. Mukhopadhyay, H.-C. Yen, M. Fields, T. C. Hazen, A. P. Adam, J. Keasling, and J. Wall, Expression profiling of hypothetical genes in Desulfovibrio vulgaris leads to improved functional annotation. Nucleic Acids Research 37, 2926–2939, 2009.
  37. Han, B.-G., M. Dong, H. Liu, L. Camp, J. Geller, M. Singer, T. C. Hazen, M. Choi, H. E. Witkowska, D. A. Ball, D. Typke, K. H. Downing, M. Shatsky, S. E. Brenner, J.-M. Chandonia, M. D. Biggin, and R. M. Glaeser, Survey of large protein complexes in Desulfovibrio vulgaris reveals great structural diversity.   Proceedings of the National Academy of Sciences (PNAS) (in press), published online September 2009
  38. Hazen, T. C. e., 4th Annual DOE-ERSP PI Meeting: Abstracts. LBNL Report, Landsdowne, VA. April 20–23, 2009.
  39. Hazen, T. C., Cometabolic bioremediation. In: Handbook of Hydrocarbon Microbiology: Microbial Interactions with Hydrocarbons, Oils, Fats, and Related Hydrophobic Substrates and Products. K. N. Timmis (Editor) Springer Verlag, 2009.
  40. Hazen, T. C., In situ groundwater bioremediation. In: Handbook of Hydrocarbon Microbiology: Microbial Interactions with Hydrocarbons, Oils, Fats, and Related Hydrophobic Substrates and Products. K. N. Timmins (Editor) Springer Verlag, 2009.
  41. Hazen, T.C., Biostimulation. In: Handbook of Hydrocarbon Microbiology: Microbial Interactions with Hydrocarbons, Oils, Fats, and Related Hydrophobic Substrates and Products (in press), K.N. Timmis, ed., Springer Verlag, 2009.
  42. Hazen, Terry C., Romy Chakraborty, James M. Fleming, Ingrid R. Gregory, John P. Bowman, Luis Jimenez, Dai Zhang, Susan M. Pfiffner, Fred J. Brockman, and Gary S. Sayler, Use of gene probes to assess the impact and effectiveness of aerobic in situ bioremediation of TCE. Arch. Microbiol., 191, 221–232, 2009.
  43. Holman, H.-Y., E. Wozei, Z. Lin, L. Comolli, D. Ball, S. Borglin, M. Fields, T.C. Hazen, and K. Downing, Real-time molecular monitoring of chemical environment in obligate anaerobes during oxygen adaptive response. Proceedings of the National Academy of Sciences, published online June 2009.
  44. Hjort, K., M. Bergström, M.F. Adesina, J.K Jansson, K. Smalla, and S. Sjöling, Chitinase genes revealed and compared in bacterial isolates, DNA extracts and a metagenomic library from a phytopathogen suppressive soil.  FEMS Microbiology Ecology (in press), 2009.
  45. Hubbard, S.S., et al., Contaminant remediation.  In: Subsurface Sensing, Chapter 10, John Wiley, New York, 2009.
  46. Melton, S. J., H. Yu, M.F. Ali, K.H. Williams, M.J. Wilkins, P.E. Long, and D.A. Blake (2008), Detection of hexavalent uranium with inline and field-portable immunosensors, in Uranium, Mining and Hydrogeology, edited by B. J. M. a. A. Hasche-Berger, Springer-Verlag, Berlin.
  47. Mouser, P. J., A. Lucie N’Guessan, Hila Elifantz, Dawn E. Holmes, Kenneth H. Williams, Michael J. Wilkins, Philip E. Long, and Derek R. Lovley (2009), Impact of heterogeneous ammonium availability on bacterial community structure and the expression of nitrogen fixation and ammonium transporter genes during in situ bioremediation of uranium-contaminated groundwater, Environ. Sci. & Technol., 43, 4386-4392.
  48. Navarre-Sitchler, A., C.I. Steefel, L. Yang, L. Tomutsa, and S.L. Brantley, Evolution of porosity and diffusivity associated with chemical weathering of a basalt clast.  Journal of Geophysical Research (in press), 2009.
  49. N’Guessan, L.A., H. Elifantz1, K.P. Nevin1, P.J. Mouser, B. Methe, T. L. Woodard, K. Manley, K.H. Williams, M.J. Wilkins, J.T. Larsen, P.E. Long, and D.R. Lovley,  Molecular analysis of phosphate limitation in Geobacteraceae during the bioremediation of a uranium-contaminated aquifer. ISME Journal (in press), 2009.
  50. Revil A., C.A. Mendonça, E.A. Atekwana, B. Kulessa, S.S. Hubbard, and K. Bohlen, Understanding biogeobatteries: Where geophysics meets microbiology.  Journal of Geophysical Research–Biogeosciences (in press), 2009.
  51. Nico, P. S., B.D. Stewart, and S. Fendorf, Incorporation of oxidized uranium into Fe (hydr)oxides during Fe(II) catalyzed remineralization.  Environ. Sci. & Technol., 43 (19), 7391–7396, 2009.
  52. Slater, L., E Atekwana, S. Brantley, Y. Gorby, S. S. Hubbard, R. Knight, D Morgan, A. Revil, S. Rossbach, and N. Yee, Exploring the geophysical signatures of microbial processes.  EOS, 2009.
  53. Steefel, C., and K. Maher, Fluid-rock interaction: A reactive transport approach.  Reviews in Mineralogy and Geochemistry, 70, 2009.Stewart, B.D., P.S. Nico, and S. Fendorf, Stability of uranium incorporated into Fe(hydr)oxides under fluctuating redox conditions.  Environmental Science & Technology, 43(13), 4922–4927, 2009.
  54. Tokunaga, T.K., Y. Kim, and J. Wan, Potential remediation approach for uranium-contaminated groundwaters through potassium uranyl vanadate precipitation. LBNL-2688E. Environ. Sci. Technol., 43 (14), 5467–5471, DOI: 10.1021/es900619s, 2009
  55. Tokunaga, TK., J. Wan, Y. Kim, S.R. Sutton, M. Newville, A. Lanzirotti, W. Rao, "Real-Time X-ray Absorption Spectroscopy of Uranium, Iron, and Manganese in Contaminated Sediments During Bioreduction," Environ. Sci. Technol., 42(8), 2839-2844 (2008). Press Article.
  56. Tufano, K.J., S.G. Benner, K.U. Mayer, M.A. Marcus, P.S. Nico, and S. Fendorf , Aggregate-scale heterogeneity in iron (hydr)oxide reductive transformations. Vadose Zone Journal, 8 (4) , 1004­–1012, 2009.
  57. Van Nostrand, J. D., W.-M. Wu, L. Wu, Y. Deng, J. Carley, S. Carroll, Z. He, B. Gu, J. Luo, C. S. Criddle, D. B. Watson, P. M. Jardine, J. M. Tiedje, T. C. Hazen, and J. Zhou, GeoChip-based analysis of functional microbial communities in a bioreduced uranium-contaminated aquifer during reoxidation by oxygen.  Environ. Microbiol. (in press), doi:10.1111/j.1462-2920.2009.01986.x, 2009.
  58. Waldron, P.J., L. Wu, J.D. Van Nostrand, C.W. Schadt, D.B. Watson, P.M. Jardine, A.V. Palumbo, T.C. Hazen, and J. Zhou, Functional gene array-based analysis of microbial community structure in groundwaters with a gradient of contaminant levels.   Environ. Sci. & Technol., 43, 3529–3534, 2009.
  59. Walker, C. B., S. Stolyar, D. Chivian, N. Pinel, J.A. Gabster, P.S. Dehal, Z. He, Z. Koo Yang, H.-C. B. Yen, J. Zhou, J.D. Wall, T.C. Hazen, A.P. Arkin, and D.A. Stahl, Contribution of mobile genetic elements to Desulfovibrio vulgaris genome plasticity.   Environmental Microbiology, 11 (9), doi:10.1111/j.1462-2920.2009.01946.x, 2009.
  60. Wan, J., Y. Kim, T.K. Tokunaga, Z. Wang, S. Dixit, C.I. Steefel, E. Saiz, M. Kunz and N. Tamura, Spatially resolved U(VI) partitioning and speciation: Implications for plume scale behavior of contaminant U in the Hanford vadose zone, Environ. Sci. Tech. DOI: 10.1021/es802801b, 2009.
  61. Wu, Yuxin, R. Versteeg, L. Slater, and D. LaBrecque, Calcite precipitation dominates the electrical signatures of zero valent iron columns under simulated field conditions.  Journal of Contaminant Hydrology 106 (3-4), 131-143, 2009.
  62. Wilkins, M.J., N.C. VerBerkmoes, K.H. Williams, S.J. Callister, P.J. Mouser, H. Elifantz, A.L. N’Guessan, B.C. Thomas, C.D. Nicora, M.B. Shah, P. Abraham, M.S. Lipton, D.R. Lovley, R.L. Hettich, P.E. Long, and J.F. Banfield, Proteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation. LBNL-2715E. Applied and Environmental Microbiology, 75 (20), 6591–6599, 2009.
  63. Williams, K.H., A. Kemna, M. Wilkins, J. Druhan, E. Arntzen, L. N’Guessan, P.E. Long, S.S. Hubbard, and J.F. Banfield, Geophysical monitoring of coupled microbial and geochemical processes during stimulated subsurface bioremediation.  Environ. Sci. Technol., 43, 6717–6723, DOI 10.1021/es900855j, 2009
  64. Chen, J., A. Kemna and S. Hubbard, A comparison between Gauss-Newton and Markov-chair Monte Carlo-based methods for inverting spectral induced-polarization data for Cole-Cole parameters, Geophysics, 73(6), F247-F259, DOI 10.1190/1.2976115, 2008.
  65. Christensen, J.N., Conrad, M.E., D.J. DePaolo, and P. E. Dresel, 2007, Isotopic Studies of Contaminant Transport at the Hanford Site, WA: Vadose Zone J. 6, 1018-1030.
  66. Conrad, M.E., D.J. DePaolo, K. Maher, G.W. Gee, and A.L. Ward, 2007, Field evidence for strong chemical separation of contaminants in the Hanford vadose zone: Vadose Zone J. 6, 1031-1041.
  67. Deng, X., A. Verdaguer, T. Herranz, Ch.D. Weiss, H. Bluhm, M. Salmeron, The surface chemistry of Cu in the presence of CO2 and H2O, accepted for publication in Langmuir (2008). Druhan, J.L., M.E. Conrad, K.H. Williams, L. N’Guessan, P.E. Long, and S.S. Hubbard, Accepted for Publication, Sulfur Isotopes as Indicators of Amended Bacterial Sulfate Reduction Processes Influencing Field Scale Uranium Bioremediation: Environ. Sci. Technol.,  2008.
  68. Druhan, J.L., M.E. Conrad, D.H. Williams, L. N’Guessan, P.E. Long and S.S. Hubbard, Sulfur Isotopes as Indicators of Amended Bacterial Sulfate Reduction Processes Influencing Field Scale Uranium Bioremediation, Environ. Sci. Technol, 42, 7842-7849, 2008.
  69. Faybishenko, B., T.C. Hazen P. E. Long, E.L. Brodie, M.E. Conrad, S.S. Hubbard, J. N. Christensen, D. Joyner, S. E. Borglin, R. Chakraborty, K. H. Williams, J. E. Peterson, J. Chen, S. T. Brown, T. K. Tokunaga, J. Wan, M. Firestone, D. R. Newcomer, C. T. Resch, K. J. Cantrell, A. Willett and S. Koenigsberg, In Situ Long-Term Reductive Bioimmobilization of Cr(VI) in Groundwater Using Hydrogen Release Compound, Environmental Science & Technology, 42 (22), 8478-8485, 2008.
  70. Hopp, L.; Nico, P.S.; Marcus, M.A.; Peiffer, S. Arsenic and chromium partitioning in a podzolic soil contaminated by chromated copper arsenate. Environ. Sci. and Technol., 2008
  71. Hubbard, S.S., K. Williams, M. Conrad, B. Faybishenko, J. Peterson, J. Chen, P. Long and T. Hazen, Geophysical monitoring of hydrological and biogeochemical transformations associated with Cr(VI) Biostimulation, Environmental Science & Technology, 42(10) pp 3757 - 3765; DOI 10.1021/es071702s, 2008.
  72. Hubbard, S.S., The Evolution of Hydrogeophysics, Invited Retrospective on one of the ‘Most Influential TLE Papers of the Last 25 Years: Hubbard et al., 1997’, The Leading Edge of Exploration, SEG, Vol.27, No2., 2008.
  73. Kim, C.S., C.J. Lentini, and G.A. Waychunas, Associations between iron oxyhydroxide nanoparticle growth and metal adsorption/structural incorporation. In: Adsorption of Metals by Geomedia II, M. Barnett and D. Kent, eds., Elsevier Developments in Earth & Environmental Sciences, 7, Chapter 6, pp.153–187, 2008.
  74. Lambot, S., A. Binley, E. Slob and S. Hubbard, Ground Penetrating Radar in Hydrogeophysics, Vadose Zone Journal, 7(1), 137-139, 2008.
  75. Li, L., C.I. Steefel, L. Yang, 2008, Scale dependence of mineral dissolution rates within single pores and fractures, Geochimica Cosmochimica Acta 72(2), 360-377.
  76. Li, W., A. Englert, O.A. Cirpka, and H. Vereecken, Three-dimensional geostatistical inversion of flowmeter and pumping-test data. Ground Water, 46 (2), 193–201, 2008.
  77. Linde, N., A. Tryggvason, J.E. Peterson and S.S. Hubbard, Joint inversion of crosshole radar and seismic traveltimes acquired at the South Oyster Bacterial Transport Site, Geophysics, V. 73(4), G29-G37, 10.1190/1.2937467, 2008 .
  78. Maggi, F., C. Gu, W. J. Riley, G. M. Hornberger, R. T. Venterea, T. Xu, N. Spycher, C. Steefel, N. L. Miller, and C. M Oldenburg, 2008, A mechanistic treatment of the dominant soil nitrogen cycling processes: Model development, testing, and application, J. Geophysical Research, 113, G02016, doi:10.1029/2007JG000578.
  79. McKinley, J. P., J. M. Zachara, J. Wan, D. E. McCready, and S. M. Heald, Geochemical controls on contaminant uranium in vadose Hanford formation sediments at the 200 Area and 300 Area, Hanford Site, Washington, Vadose Zone J. 6:1004–1017. 2007.
  80. Mukhopadhyay, A., A. M. Redding, M. P. Joachimiak, A. P. Arkin, S. E. Borglin, P. S. Dehal, R. Chakraborty, J. T. Geller, T. C. Hazen, D. C. Joyner, V. J. J. Martin, J. D. Wall, Z. K. Yank, J. Zhou, and J. D. Keasling. 2007. Cell wide response to low oxygen exposure in Desulfovibrio vulgaris Hildenborough. J. Bacteriol. 189:5996-6010. (4.013, 3)
  81. Nico, P.S.; Kumfer, B.K.; Kennedy, I.M.; Anastasio, C.; “Redox Dynamics of Mixed Metal (Mn, Cr, and Fe) Ultrafine Particles”,  Aerosol Science and Technology 2008.
  82. Niess, J.; Stewart, B.D.; Nico, P.S.; Fendorf, S.E., Environ. Sci. and Technol., 2007, 41(21) 7343-7348 “Speciation Dependent Microbial Reduction of Uranium Within Iron-coated Sands under Dynamic Flow”.
  83. Personna, Y., D. Ntarlagiannis, L. Slater, N. Yee, M. O’Brien and S. Hubbard, Spectral Induced Polarization Monitoring and Modeling of Microbial-Mediated Iron Sulfide Transformations, J. Geophys. Res., 113, G02020, doi:10.1029/2007JG000614, 2008.
  84. Salmeron, M. , H. Bluhm, M. Tatarkhanov, G. Ketteler, T. Shimizu, A. Mugarza, X. Deng, T. Herranz, S. Yamamoto, A. Nilsson, Water growth on metals and oxides: binding, dissociation and role of hydroxyl groups, accepted for publication in Faraday Discussions, 2008.
  85. Slater, L., D. Ntarlagniannis, Y. Personna and S. Hubbard, Pore-scale Spectral Induced Polarization (SIP) signatures associated with FeS biomineral transformations, Geophysical Research Letters, V. 34, L21404, doi:10.1029/2007GL031840, 2007.
  86. Soler, J. M., Marco Boi, José Luis Mogollón, Jordi Cama, Carlos Ayora, Peter S. Nico, Nobumichi Tamura, and Martin Kunz, The passivation of calcite by acid mine water. Column experiments with Fe(III)-SO4-H+ and Fe(III)-Cl-H+ solutions at pH 2. Applied Geochemistry, 2008.
  87. Steefel, C.I, 2007, Geochemical kinetics and transport, in Kinetics of Water-Rock Interaction (eds. S.L. Brantley, J.D. Kubicki, A.F. White), Springer, New York, pp. 545-589.
  88. Stolyar, S., Q. He, M. P. Joachimiak, Z. He, Z. K. Yang, S. E. Borglin, D. C. Joyner, K. Huang, E. Alm, T. C. Hazen, J. Zhou, J. D. Wall, A. P. Arkin, and D. A. Stahl. 2007. Response of Desulfovibrio vulgaris to alkaline stress. J. Bacteriol. 189:8944-8952. (4.013, 0)
  89. Tang, Y. J., R. Chakraborty, H. García Martín, J. Chu, T. C. Hazen, and J. D. Keasling. 2007. Flux analysis of central metabolic pathways in Geobacter metallireducens during reduction of soluble Fe (III)-NTA. Appl. Environ. Microbiol. 73:3859-3864. (4.004, 2)
  90. Tang, Y., F. Pingitore, A. Mukhopadhyay, R. Phan, T. C. Hazen, and J. D. Keasling. 2007. Pathway confirmation and flux analysis using 13C isotopic labeling of metabolites in Desulfovibrio vulgaris Hildenborough via FT-ICR Mass Spectrometry. J. Bacteriol. 189:940-949. (4.013, 6).
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